Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
MYCNP04198 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 MT-RNR1-201ENST00000389680 954 ntBASIC16.91■□□□□ 0.3
MYCNP04198 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.91■□□□□ 0.3
MYCNP04198 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 UBE2V2P1-201ENST00000434717 398 ntBASIC16.91■□□□□ 0.3
MYCNP04198 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC16.91■□□□□ 0.3
MYCNP04198 RPS15AP29-201ENST00000445539 400 ntBASIC16.91■□□□□ 0.3
MYCNP04198 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
MYCNP04198 PRDX3P4-201ENST00000470828 747 ntBASIC16.91■□□□□ 0.3
MYCNP04198 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC16.91■□□□□ 0.3
MYCNP04198 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC16.91■□□□□ 0.3
MYCNP04198 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.91■□□□□ 0.3
MYCNP04198 AC134349.2-201ENST00000535136 910 ntBASIC16.91■□□□□ 0.3
MYCNP04198 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.91■□□□□ 0.3
MYCNP04198 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 AC015936.1-201ENST00000591013 1028 ntBASIC16.91■□□□□ 0.3
MYCNP04198 AC136469.1-201ENST00000595706 511 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 AC004004.1-201ENST00000603784 250 ntBASIC16.91■□□□□ 0.3
MYCNP04198 AC004492.1-201ENST00000607036 742 ntBASIC16.91■□□□□ 0.3
MYCNP04198 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 AC087284.1-201ENST00000614119 1049 ntBASIC16.91■□□□□ 0.3
MYCNP04198 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 AC138627.1-204ENST00000641894 765 ntBASIC16.91■□□□□ 0.3
MYCNP04198 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 CICP24-201ENST00000605464 2705 ntBASIC16.91■□□□□ 0.3
MYCNP04198 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 FLJ22447-202ENST00000556569 1312 ntTSL 2 BASIC16.91■□□□□ 0.3
MYCNP04198 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 CYB5B-204ENST00000515314 1658 ntTSL 5 BASIC16.91■□□□□ 0.3
MYCNP04198 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MYCNP04198 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.9■□□□□ 0.3
MYCNP04198 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.9■□□□□ 0.3
MYCNP04198 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC16.9■□□□□ 0.3
MYCNP04198 AC021755.1-201ENST00000559747 1447 ntBASIC16.9■□□□□ 0.3
MYCNP04198 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.9■□□□□ 0.3
MYCNP04198 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
MYCNP04198 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
MYCNP04198 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MYCNP04198 RNU6-167P-201ENST00000384292 106 ntBASIC16.9■□□□□ 0.3
MYCNP04198 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
MYCNP04198 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.9■□□□□ 0.3
MYCNP04198 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC16.9■□□□□ 0.3
MYCNP04198 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC16.9■□□□□ 0.3
MYCNP04198 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MYCNP04198 snoU109.3-201ENST00000459477 145 ntBASIC16.9■□□□□ 0.3
MYCNP04198 AC104164.3-201ENST00000467363 1258 ntBASIC16.9■□□□□ 0.3
MYCNP04198 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.9■□□□□ 0.3
MYCNP04198 AC125604.1-201ENST00000496255 707 ntBASIC16.9■□□□□ 0.3
MYCNP04198 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.9■□□□□ 0.3
MYCNP04198 AC114781.2-201ENST00000515670 394 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms