Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
APOBP04114 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
APOBP04114 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
APOBP04114 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
APOBP04114 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 GGT8P-201ENST00000418938 532 ntBASIC8.28□□□□□ -1.08
APOBP04114 HNRNPA1P30-202ENST00000440699 997 ntBASIC8.28□□□□□ -1.08
APOBP04114 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC8.28□□□□□ -1.08
APOBP04114 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC8.28□□□□□ -1.08
APOBP04114 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 AP001505.1-201ENST00000569966 824 ntBASIC8.28□□□□□ -1.08
APOBP04114 RN7SL624P-201ENST00000580297 278 ntBASIC8.28□□□□□ -1.08
APOBP04114 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC8.28□□□□□ -1.08
APOBP04114 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC8.28□□□□□ -1.08
APOBP04114 PIGA-209ENST00000634582 965 ntTSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC8.28□□□□□ -1.08
APOBP04114 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC8.28□□□□□ -1.08
APOBP04114 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
APOBP04114 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC8.28□□□□□ -1.08
APOBP04114 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.08
APOBP04114 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
APOBP04114 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
APOBP04114 AL356653.1-201ENST00000402743 360 ntBASIC8.27□□□□□ -1.08
APOBP04114 AC233724.7-201ENST00000511476 253 ntBASIC8.27□□□□□ -1.08
APOBP04114 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC8.27□□□□□ -1.08
APOBP04114 Z93930.2-203ENST00000585003 516 ntBASIC8.27□□□□□ -1.08
APOBP04114 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC8.27□□□□□ -1.08
APOBP04114 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
APOBP04114 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
APOBP04114 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC8.27□□□□□ -1.08
APOBP04114 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC8.27□□□□□ -1.08
APOBP04114 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
APOBP04114 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.08
APOBP04114 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
APOBP04114 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 TNRC18P2-201ENST00000417666 2714 ntBASIC8.27□□□□□ -1.09
APOBP04114 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 AC015959.1-201ENST00000623263 1377 ntBASIC8.27□□□□□ -1.09
APOBP04114 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC8.27□□□□□ -1.09
APOBP04114 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 AC009238.3-201ENST00000512705 217 ntBASIC8.27□□□□□ -1.09
APOBP04114 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC8.27□□□□□ -1.09
APOBP04114 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC8.27□□□□□ -1.09
APOBP04114 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 MIR4726-201ENST00000615971 58 ntBASIC8.27□□□□□ -1.09
APOBP04114 MIR941-1-201ENST00000636396 72 ntBASIC8.27□□□□□ -1.09
APOBP04114 AL590824.1-201ENST00000403828 1349 ntBASIC8.27□□□□□ -1.09
APOBP04114 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC8.27□□□□□ -1.09
APOBP04114 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
APOBP04114 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 RBM14-203ENST00000409372 876 ntTSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC8.27□□□□□ -1.09
APOBP04114 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC8.27□□□□□ -1.09
APOBP04114 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 AL353997.3-201ENST00000586597 589 ntBASIC8.27□□□□□ -1.09
APOBP04114 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
APOBP04114 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC8.27□□□□□ -1.09
APOBP04114 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC8.27□□□□□ -1.09
APOBP04114 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 KRT18P40-201ENST00000599859 1571 ntBASIC8.27□□□□□ -1.09
APOBP04114 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
APOBP04114 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
APOBP04114 ARF1P2-201ENST00000392493 538 ntBASIC8.27□□□□□ -1.09
APOBP04114 PEBP1P1-201ENST00000554856 510 ntBASIC8.27□□□□□ -1.09
APOBP04114 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC8.27□□□□□ -1.09
APOBP04114 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
APOBP04114 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms