Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PDGFBP01127 FAM86FP-201ENST00000338711 969 ntBASIC13.78□□□□□ -0.2
PDGFBP01127 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC13.78□□□□□ -0.2
PDGFBP01127 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 NAA10-205ENST00000393712 908 ntTSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC13.78□□□□□ -0.2
PDGFBP01127 NOS2P3-201ENST00000411468 867 ntBASIC13.78□□□□□ -0.2
PDGFBP01127 NOS2P2-201ENST00000426269 867 ntBASIC13.78□□□□□ -0.2
PDGFBP01127 IQCF4-203ENST00000428561 420 ntBASIC13.78□□□□□ -0.2
PDGFBP01127 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC13.78□□□□□ -0.2
PDGFBP01127 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.78□□□□□ -0.2
PDGFBP01127 HNRNPA1P73-201ENST00000446472 928 ntBASIC13.78□□□□□ -0.2
PDGFBP01127 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 RN7SL22P-201ENST00000471800 269 ntBASIC13.78□□□□□ -0.2
PDGFBP01127 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC13.78□□□□□ -0.2
PDGFBP01127 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 PDPN-208ENST00000509009 571 ntTSL 4 BASIC13.78□□□□□ -0.2
PDGFBP01127 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC13.78□□□□□ -0.2
PDGFBP01127 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.78□□□□□ -0.2
PDGFBP01127 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PDGFBP01127 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC13.78□□□□□ -0.2
PDGFBP01127 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PDGFBP01127 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC13.78□□□□□ -0.2
PDGFBP01127 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PDGFBP01127 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.78□□□□□ -0.2
PDGFBP01127 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC13.78□□□□□ -0.2
PDGFBP01127 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 AL109954.1-202ENST00000564051 2148 ntBASIC13.78□□□□□ -0.2
PDGFBP01127 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.78□□□□□ -0.2
PDGFBP01127 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PDGFBP01127 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PDGFBP01127 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
PDGFBP01127 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.77□□□□□ -0.2
PDGFBP01127 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
PDGFBP01127 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PDGFBP01127 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PDGFBP01127 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
PDGFBP01127 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 AL031577.1-201ENST00000339867 399 ntBASIC13.77□□□□□ -0.21
PDGFBP01127 SNORA30.1-201ENST00000363193 129 ntBASIC13.77□□□□□ -0.21
PDGFBP01127 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PDGFBP01127 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 TMEM256P1-201ENST00000430550 340 ntBASIC13.77□□□□□ -0.21
PDGFBP01127 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC13.77□□□□□ -0.21
PDGFBP01127 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC13.77□□□□□ -0.21
PDGFBP01127 AC008021.1-201ENST00000474180 414 ntBASIC13.77□□□□□ -0.21
PDGFBP01127 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC13.77□□□□□ -0.21
PDGFBP01127 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC13.77□□□□□ -0.21
PDGFBP01127 HAX1-211ENST00000532105 771 ntTSL 3 BASIC13.77□□□□□ -0.21
PDGFBP01127 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.77□□□□□ -0.21
PDGFBP01127 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC13.77□□□□□ -0.21
PDGFBP01127 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 AL139317.2-201ENST00000556998 158 ntBASIC13.77□□□□□ -0.21
PDGFBP01127 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC13.77□□□□□ -0.21
PDGFBP01127 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC13.77□□□□□ -0.21
PDGFBP01127 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.77□□□□□ -0.21
PDGFBP01127 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC13.77□□□□□ -0.21
PDGFBP01127 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PDGFBP01127 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PDGFBP01127 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDGFBP01127 AC013268.4-201ENST00000637413 2228 ntBASIC13.76□□□□□ -0.21
PDGFBP01127 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.76□□□□□ -0.21
PDGFBP01127 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PDGFBP01127 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms