Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 RN7SKP109-201ENST00000410592 316 ntBASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AC012362.1-201ENST00000434906 739 ntBASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 RNA5SP417-201ENST00000516459 108 ntBASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 OR5BD1P-201ENST00000532527 817 ntBASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 RN7SL665P-201ENST00000578793 300 ntBASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AL133467.4-201ENST00000602953 725 ntBASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 MIR6858-201ENST00000620733 67 ntBASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AC009084.3-201ENST00000623356 437 ntBASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.77□□□□□ -0.36
NPIPA3F8WFD2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 HMGA1P1-201ENST00000415560 1062 ntBASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 GUSBP10-201ENST00000417412 665 ntBASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 AC092638.2-201ENST00000441105 947 ntBASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 AC004837.1-201ENST00000446267 564 ntBASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 AC011474.4-201ENST00000623523 2076 ntBASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.77□□□□□ -0.37
NPIPA3F8WFD2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms