Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 AC016550.3-201ENST00000515706 767 ntBASIC12.8□□□□□ -0.36
USB1Q9BQ65 AC090857.1-201ENST00000527400 390 ntBASIC12.8□□□□□ -0.36
USB1Q9BQ65 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 ADAD1P2-201ENST00000588476 646 ntBASIC12.8□□□□□ -0.36
USB1Q9BQ65 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 AC063944.3-201ENST00000609969 533 ntBASIC12.8□□□□□ -0.36
USB1Q9BQ65 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 AC092964.1-201ENST00000623304 1399 ntBASIC12.8□□□□□ -0.36
USB1Q9BQ65 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 INSL6-201ENST00000381641 758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 RN7SL769P-201ENST00000469386 295 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC006122.1-201ENST00000493323 440 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 RCC2P8-201ENST00000502779 1035 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 ACTG1P17-201ENST00000558391 1119 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 MIR3188-201ENST00000583494 85 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC005962.1-201ENST00000584100 773 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC097065.2-201ENST00000608159 533 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AP001505.2-201ENST00000616815 443 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC091812.3-201ENST00000621362 345 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AL627171.1-201ENST00000618845 1308 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms