Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 SERPINB8P1-201ENST00000401898 377 ntBASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 PTPA-219ENST00000435305 530 ntTSL 2 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 AC104759.1-201ENST00000559109 939 ntBASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 OR7E122P-201ENST00000383606 1017 ntBASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 SOD1-202ENST00000389995 865 ntTSL 3 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 AC004884.1-201ENST00000393647 319 ntBASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 SNORA50D-201ENST00000408059 134 ntBASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 HNRNPA1P4-201ENST00000509706 756 ntBASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 FTH1-205ENST00000529631 507 ntTSL 4 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 ALG10-202ENST00000538927 571 ntTSL 5 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 MED11-203ENST00000575284 652 ntTSL 3 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 AC092535.4-201ENST00000609548 397 ntBASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTF1AQ7RTS3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTF1AQ7RTS3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.39■□□□□ 0.38
PTF1AQ7RTS3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTF1AQ7RTS3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTF1AQ7RTS3 LINC00552-201ENST00000625151 2579 ntBASIC17.39■□□□□ 0.38
PTF1AQ7RTS3 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC17.39■□□□□ 0.38
PTF1AQ7RTS3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PTF1AQ7RTS3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 GBAP1-208ENST00000566701 1546 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 RN7SKP255-201ENST00000363442 313 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 RN7SKP203-201ENST00000363618 332 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 RN7SKP71-201ENST00000364558 318 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 7SK.1-201ENST00000365328 331 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 HMGN1P4-201ENST00000419500 290 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 AC010997.1-201ENST00000447646 350 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 AC005011.1-201ENST00000455206 210 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 BICD1P1-201ENST00000457832 1222 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 FAM223B-202ENST00000598177 713 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 AL356740.1-201ENST00000602192 1297 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 BAP1-211ENST00000615113 489 ntBASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC17.39■□□□□ 0.37
PTF1AQ7RTS3 FAM223A-202ENST00000625204 713 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms