Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SSR1P43307 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SSR1P43307 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 PPP1R26P2-201ENST00000611403 3595 ntBASIC15.01□□□□□ -0.01
SSR1P43307 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SSR1P43307 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 AC022210.1-201ENST00000449856 793 ntBASIC15.01□□□□□ -0.01
SSR1P43307 RNMTL1P1-201ENST00000454103 560 ntBASIC15.01□□□□□ -0.01
SSR1P43307 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.01□□□□□ -0.01
SSR1P43307 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 PGAM1P5-201ENST00000548011 764 ntBASIC15.01□□□□□ -0.01
SSR1P43307 AL512310.5-201ENST00000551999 515 ntBASIC15.01□□□□□ -0.01
SSR1P43307 AP005482.1-201ENST00000563722 1273 ntBASIC15.01□□□□□ -0.01
SSR1P43307 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.01□□□□□ -0.01
SSR1P43307 AC017083.2-201ENST00000608069 979 ntBASIC15.01□□□□□ -0.01
SSR1P43307 AC090386.2-201ENST00000623010 1039 ntBASIC15.01□□□□□ -0.01
SSR1P43307 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSR1P43307 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SSR1P43307 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.01□□□□□ -0.01
SSR1P43307 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SSR1P43307 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15□□□□□ -0.01
SSR1P43307 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15□□□□□ -0.01
SSR1P43307 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
SSR1P43307 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SSR1P43307 AL590824.1-201ENST00000403828 1349 ntBASIC15□□□□□ -0.01
SSR1P43307 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SSR1P43307 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15□□□□□ -0.01
SSR1P43307 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15□□□□□ -0.01
SSR1P43307 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15□□□□□ -0.01
SSR1P43307 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15□□□□□ -0.01
SSR1P43307 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSR1P43307 Z93015.1-201ENST00000451718 390 ntBASIC15□□□□□ -0.01
SSR1P43307 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15□□□□□ -0.01
SSR1P43307 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15□□□□□ -0.01
SSR1P43307 AC022217.1-201ENST00000521069 738 ntBASIC15□□□□□ -0.01
SSR1P43307 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 AC005730.2-201ENST00000564549 1184 ntBASIC15□□□□□ -0.01
SSR1P43307 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15□□□□□ -0.01
SSR1P43307 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15□□□□□ -0.01
SSR1P43307 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15□□□□□ -0.01
SSR1P43307 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15□□□□□ -0.01
SSR1P43307 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms