Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFC3P40938 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RFC3P40938 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.89□□□□□ -0.35
RFC3P40938 HSPA7-201ENST00000445535 1927 ntBASIC12.89□□□□□ -0.35
RFC3P40938 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.89□□□□□ -0.35
RFC3P40938 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RFC3P40938 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.89□□□□□ -0.35
RFC3P40938 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.89□□□□□ -0.35
RFC3P40938 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFC3P40938 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.89□□□□□ -0.35
RFC3P40938 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFC3P40938 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.89□□□□□ -0.35
RFC3P40938 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFC3P40938 IL9RP3-201ENST00000442856 1674 ntBASIC12.89□□□□□ -0.35
RFC3P40938 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RFC3P40938 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFC3P40938 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFC3P40938 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RFC3P40938 CICP16-201ENST00000502609 2813 ntBASIC12.89□□□□□ -0.35
RFC3P40938 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RFC3P40938 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RFC3P40938 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.88□□□□□ -0.35
RFC3P40938 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RFC3P40938 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 AL359881.3-201ENST00000602640 1721 ntBASIC12.88□□□□□ -0.35
RFC3P40938 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.88□□□□□ -0.35
RFC3P40938 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.88□□□□□ -0.35
RFC3P40938 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
RFC3P40938 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.88□□□□□ -0.35
RFC3P40938 GUSBP10-201ENST00000417412 665 ntBASIC12.88□□□□□ -0.35
RFC3P40938 AC012362.1-201ENST00000434906 739 ntBASIC12.88□□□□□ -0.35
RFC3P40938 AC130709.1-201ENST00000484779 1212 ntBASIC12.88□□□□□ -0.35
RFC3P40938 RNA5SP417-201ENST00000516459 108 ntBASIC12.88□□□□□ -0.35
RFC3P40938 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.88□□□□□ -0.35
RFC3P40938 OR5BD1P-201ENST00000532527 817 ntBASIC12.88□□□□□ -0.35
RFC3P40938 AL512310.5-201ENST00000551999 515 ntBASIC12.88□□□□□ -0.35
RFC3P40938 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.88□□□□□ -0.35
RFC3P40938 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.88□□□□□ -0.35
RFC3P40938 RN7SL665P-201ENST00000578793 300 ntBASIC12.88□□□□□ -0.35
RFC3P40938 MIR4649-201ENST00000582839 64 ntBASIC12.88□□□□□ -0.35
RFC3P40938 RN7SL470P-201ENST00000583069 259 ntBASIC12.88□□□□□ -0.35
RFC3P40938 AP000322.3-201ENST00000608665 388 ntBASIC12.88□□□□□ -0.35
RFC3P40938 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC12.88□□□□□ -0.35
RFC3P40938 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.88□□□□□ -0.35
RFC3P40938 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.88□□□□□ -0.35
RFC3P40938 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
RFC3P40938 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RFC3P40938 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.88□□□□□ -0.35
RFC3P40938 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.88□□□□□ -0.35
RFC3P40938 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.88□□□□□ -0.35
RFC3P40938 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.88□□□□□ -0.35
RFC3P40938 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.88□□□□□ -0.35
RFC3P40938 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RFC3P40938 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RFC3P40938 AC015802.1-201ENST00000588104 1449 ntBASIC12.88□□□□□ -0.35
RFC3P40938 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
RFC3P40938 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
RFC3P40938 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.87□□□□□ -0.35
RFC3P40938 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.87□□□□□ -0.35
RFC3P40938 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RFC3P40938 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.87□□□□□ -0.35
RFC3P40938 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.87□□□□□ -0.35
RFC3P40938 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.87□□□□□ -0.35
RFC3P40938 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.87□□□□□ -0.35
RFC3P40938 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
RFC3P40938 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.87□□□□□ -0.35
RFC3P40938 AL354861.1-201ENST00000445213 355 ntBASIC12.87□□□□□ -0.35
RFC3P40938 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.87□□□□□ -0.35
RFC3P40938 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.87□□□□□ -0.35
RFC3P40938 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms