Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.12□□□□□ -0.15
GPC4O75487 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.12□□□□□ -0.15
GPC4O75487 AC092580.1-201ENST00000433998 658 ntBASIC14.12□□□□□ -0.15
GPC4O75487 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.12□□□□□ -0.15
GPC4O75487 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.12□□□□□ -0.15
GPC4O75487 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.12□□□□□ -0.15
GPC4O75487 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.12□□□□□ -0.15
GPC4O75487 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.12□□□□□ -0.15
GPC4O75487 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 AC140658.4-201ENST00000561990 352 ntBASIC14.12□□□□□ -0.15
GPC4O75487 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.12□□□□□ -0.15
GPC4O75487 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.12□□□□□ -0.15
GPC4O75487 AL451050.2-201ENST00000606967 682 ntBASIC14.12□□□□□ -0.15
GPC4O75487 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
GPC4O75487 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
GPC4O75487 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 AC068760.1-201ENST00000493579 1953 ntBASIC14.12□□□□□ -0.15
GPC4O75487 AL445209.1-201ENST00000607269 3491 ntBASIC14.12□□□□□ -0.15
GPC4O75487 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
GPC4O75487 AP002353.1-201ENST00000528257 1599 ntBASIC14.12□□□□□ -0.15
GPC4O75487 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.12□□□□□ -0.15
GPC4O75487 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.12□□□□□ -0.15
GPC4O75487 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 AC114271.1-201ENST00000612689 2813 ntBASIC14.11□□□□□ -0.15
GPC4O75487 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 CCT8L1P-201ENST00000465400 1674 ntBASIC14.11□□□□□ -0.15
GPC4O75487 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
GPC4O75487 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC14.11□□□□□ -0.15
GPC4O75487 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.11□□□□□ -0.15
GPC4O75487 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.11□□□□□ -0.15
GPC4O75487 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 AC091804.1-201ENST00000486888 567 ntBASIC14.11□□□□□ -0.15
GPC4O75487 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 ZNF767P-206ENST00000513792 565 ntBASIC14.11□□□□□ -0.15
GPC4O75487 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.11□□□□□ -0.15
GPC4O75487 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.11□□□□□ -0.15
GPC4O75487 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.11□□□□□ -0.15
GPC4O75487 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.11□□□□□ -0.15
GPC4O75487 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.11□□□□□ -0.15
GPC4O75487 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GPC4O75487 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.11□□□□□ -0.15
GPC4O75487 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms