Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AP001189.3-201ENST00000531511 651 ntTSL 3 BASIC20.89■□□□□ 0.94
RIMBP3Q9UFD9 AP000763.1-201ENST00000539481 325 ntBASIC20.89■□□□□ 0.94
RIMBP3Q9UFD9 AC011491.3-201ENST00000595644 559 ntTSL 4 BASIC20.89■□□□□ 0.94
RIMBP3Q9UFD9 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RIMBP3Q9UFD9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
RIMBP3Q9UFD9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RIMBP3Q9UFD9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 UFSP2-201ENST00000264689 1630 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 AL356585.2-201ENST00000625078 2396 ntBASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 ALG1L10P-201ENST00000437882 424 ntBASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 AC114781.1-201ENST00000450559 1028 ntBASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 RN7SL784P-201ENST00000577319 342 ntBASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 AC022748.2-203ENST00000564933 1432 ntBASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC20.89■□□□□ 0.93
RIMBP3Q9UFD9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 TBP-201ENST00000230354 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 TUBB8P5-201ENST00000445286 1351 ntBASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 C2-211ENST00000469372 1906 ntTSL 2 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 CHMP2A-201ENST00000312547 913 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 AL031727.2-201ENST00000416470 207 ntTSL 2 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 KCNK16-203ENST00000425054 1272 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 ATF4P3-201ENST00000433309 1056 ntBASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 AC138956.2-201ENST00000512934 528 ntTSL 5 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 IGHV3-6-201ENST00000518407 347 ntBASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 AC009542.2-204ENST00000636543 433 ntTSL 3 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 AC109326.1-201ENST00000624705 1321 ntBASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIMBP3Q9UFD9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 CCDC148-203ENST00000409889 1160 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 AC092431.1-201ENST00000415342 420 ntTSL 3 BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 AL662791.4-201ENST00000445544 317 ntTSL 3 BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 AC008937.1-201ENST00000453721 914 ntTSL 3 BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 ACP2-209ENST00000530453 826 ntTSL 2 BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 LINC02395-202ENST00000547443 724 ntTSL 3 BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 AC027601.5-201ENST00000624065 2482 ntBASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 PSMC1P1-201ENST00000478110 1320 ntBASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 AL391005.1-201ENST00000623953 2435 ntBASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC20.87■□□□□ 0.93
RIMBP3Q9UFD9 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AC018529.2-202ENST00000611482 3087 ntBASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 VAMP8-201ENST00000263864 774 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 MOG-219ENST00000376898 1027 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 IGLV4-60-201ENST00000390284 362 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 HNRNPA1P24-201ENST00000476029 1046 ntBASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AC015936.1-201ENST00000591013 1028 ntBASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 SIGLEC17P-201ENST00000593736 484 ntBASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AC107375.1-201ENST00000564464 2231 ntBASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AC026471.1-201ENST00000564629 3026 ntBASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms