Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 DUX4L46-201ENST00000566845 751 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC10.71□□□□□ -0.69
VGLL1Q99990 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC10.71□□□□□ -0.69
VGLL1Q99990 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC10.71□□□□□ -0.69
VGLL1Q99990 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VGLL1Q99990 AC008735.3-201ENST00000596646 500 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 AC233724.13-201ENST00000598383 410 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 MIR6720-201ENST00000611664 98 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC10.71□□□□□ -0.69
VGLL1Q99990 AL591163.1-201ENST00000641757 987 ntBASIC10.71□□□□□ -0.69
VGLL1Q99990 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VGLL1Q99990 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VGLL1Q99990 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VGLL1Q99990 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC10.71□□□□□ -0.7
VGLL1Q99990 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
VGLL1Q99990 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
VGLL1Q99990 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
VGLL1Q99990 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
VGLL1Q99990 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
VGLL1Q99990 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
VGLL1Q99990 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VGLL1Q99990 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VGLL1Q99990 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
VGLL1Q99990 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
VGLL1Q99990 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VGLL1Q99990 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC10.7□□□□□ -0.7
VGLL1Q99990 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
VGLL1Q99990 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AC007952.5-201ENST00000572818 1486 ntBASIC10.7□□□□□ -0.7
VGLL1Q99990 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 AC006001.1-201ENST00000325130 474 ntBASIC10.7□□□□□ -0.7
VGLL1Q99990 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
VGLL1Q99990 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC10.7□□□□□ -0.7
VGLL1Q99990 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC10.7□□□□□ -0.7
VGLL1Q99990 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC10.7□□□□□ -0.7
VGLL1Q99990 HIST2H2BB-201ENST00000449108 381 ntBASIC10.7□□□□□ -0.7
VGLL1Q99990 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC10.7□□□□□ -0.7
VGLL1Q99990 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
VGLL1Q99990 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 POLE2-203ENST00000553805 496 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC10.7□□□□□ -0.7
VGLL1Q99990 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AC124068.2-201ENST00000569473 1109 ntBASIC10.7□□□□□ -0.7
VGLL1Q99990 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AL358472.5-202ENST00000641448 1267 ntBASIC10.7□□□□□ -0.7
VGLL1Q99990 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
VGLL1Q99990 AOC4P-203ENST00000566825 2289 ntBASIC10.7□□□□□ -0.7
VGLL1Q99990 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 AC134407.3-201ENST00000624035 2139 ntBASIC10.7□□□□□ -0.7
VGLL1Q99990 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC10.7□□□□□ -0.7
VGLL1Q99990 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VGLL1Q99990 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms