Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 AC126365.1-201ENST00000578585 1514 ntBASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 AC010086.2-201ENST00000428616 226 ntBASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 SRPK2P-201ENST00000523408 1100 ntBASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CCDC168Q8NDH2 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 HNRNPA1P59-201ENST00000430583 918 ntBASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 AC092865.2-201ENST00000439409 971 ntBASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 DDX11L8-201ENST00000535849 366 ntBASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
CCDC168Q8NDH2 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 PHBP3-201ENST00000412562 819 ntBASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 YY1P2-201ENST00000438766 948 ntBASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 HNRNPA1P73-201ENST00000446472 928 ntBASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AC008267.3-201ENST00000448776 712 ntBASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.55□□□□□ -0.56
CCDC168Q8NDH2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms