Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 AC006122.1-201ENST00000493323 440 ntBASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC50Q8IVM0 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 AC061965.1-201ENST00000560524 1465 ntBASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 AC005225.4-201ENST00000557330 545 ntBASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 RAB43P1-201ENST00000561790 589 ntBASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 AL162426.1-201ENST00000624141 743 ntBASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 CYP4F23P-201ENST00000593402 1579 ntBASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 MARK2P9-201ENST00000430958 1727 ntBASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC50Q8IVM0 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 AL391647.1-201ENST00000395664 511 ntBASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 COX20P2-201ENST00000452636 358 ntBASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 KRT18P15-201ENST00000458108 1291 ntBASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms