Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC253536.1-201ENST00000437021 315 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 YBX1P3-201ENST00000468366 909 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 Z82244.1-201ENST00000631502 840 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 HIST1H2APS4-202ENST00000635537 681 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 AC011239.2-201ENST00000624820 1489 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 FTLP16-201ENST00000446400 513 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 IGHV7-56-201ENST00000518372 351 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 AC063924.1-201ENST00000546680 673 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 NAT9-204ENST00000578822 839 ntTSL 3 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 AC106774.4-201ENST00000600799 409 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 AC010601.2-201ENST00000623060 774 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 AC106872.9-201ENST00000512437 1393 ntBASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13DQ5THJ4 NBEAP3-201ENST00000420638 1493 ntBASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 AC012531.1-201ENST00000562848 2680 ntBASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 AC138392.1-201ENST00000427577 921 ntBASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 RN7SL69P-201ENST00000468423 272 ntBASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 CACYBPP3-201ENST00000406011 625 ntBASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 OR10V2P-201ENST00000525296 764 ntBASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 AC239600.1-201ENST00000603201 462 ntBASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 AL109954.3-201ENST00000615088 558 ntBASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS13DQ5THJ4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AC073488.1-201ENST00000416620 1600 ntBASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms