Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC020917.4-201ENST00000623994 1999 ntBASIC16.26■□□□□ 0.19
RHBDL3P58872 AC064850.1-201ENST00000413279 1398 ntBASIC16.26■□□□□ 0.19
RHBDL3P58872 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RHBDL3P58872 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 DDC-212ENST00000615193 1674 ntTSL 3 BASIC16.25■□□□□ 0.19
RHBDL3P58872 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
RHBDL3P58872 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 PCDHA3-202ENST00000532566 4594 ntBASIC16.25■□□□□ 0.19
RHBDL3P58872 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDL3P58872 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RHBDL3P58872 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDL3P58872 AC092896.1-201ENST00000465850 380 ntBASIC16.25■□□□□ 0.19
RHBDL3P58872 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.25■□□□□ 0.19
RHBDL3P58872 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC16.25■□□□□ 0.19
RHBDL3P58872 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDL3P58872 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.25■□□□□ 0.19
RHBDL3P58872 RN7SL134P-201ENST00000579756 303 ntBASIC16.25■□□□□ 0.19
RHBDL3P58872 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RHBDL3P58872 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC16.25■□□□□ 0.19
RHBDL3P58872 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RHBDL3P58872 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RHBDL3P58872 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RHBDL3P58872 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.25■□□□□ 0.19
RHBDL3P58872 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RHBDL3P58872 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 AC067930.6-201ENST00000623257 4947 ntBASIC16.24■□□□□ 0.19
RHBDL3P58872 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RHBDL3P58872 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RHBDL3P58872 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.24■□□□□ 0.19
RHBDL3P58872 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RHBDL3P58872 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 MPV17-209ENST00000405983 859 ntTSL 5 BASIC16.24■□□□□ 0.19
RHBDL3P58872 OR7E155P-201ENST00000412208 1014 ntBASIC16.24■□□□□ 0.19
RHBDL3P58872 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC16.24■□□□□ 0.19
RHBDL3P58872 IFNWP2-201ENST00000431203 580 ntBASIC16.24■□□□□ 0.19
RHBDL3P58872 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC16.24■□□□□ 0.19
RHBDL3P58872 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC16.24■□□□□ 0.19
RHBDL3P58872 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.24■□□□□ 0.19
RHBDL3P58872 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.24■□□□□ 0.19
RHBDL3P58872 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC16.24■□□□□ 0.19
RHBDL3P58872 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 KRT8P38-201ENST00000441370 1430 ntBASIC16.24■□□□□ 0.19
RHBDL3P58872 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.24■□□□□ 0.19
RHBDL3P58872 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.24■□□□□ 0.19
RHBDL3P58872 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RHBDL3P58872 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RHBDL3P58872 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RHBDL3P58872 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RHBDL3P58872 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.23■□□□□ 0.19
RHBDL3P58872 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RHBDL3P58872 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RHBDL3P58872 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RHBDL3P58872 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RHBDL3P58872 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RHBDL3P58872 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RHBDL3P58872 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RHBDL3P58872 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.23■□□□□ 0.19
RHBDL3P58872 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RHBDL3P58872 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RHBDL3P58872 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RHBDL3P58872 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RHBDL3P58872 CR383656.2-201ENST00000548656 2254 ntBASIC16.23■□□□□ 0.19
RHBDL3P58872 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RHBDL3P58872 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RHBDL3P58872 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC16.23■□□□□ 0.19
RHBDL3P58872 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC16.23■□□□□ 0.19
RHBDL3P58872 SRPK2P-201ENST00000523408 1100 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms