Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC16■□□□□ 0.15
CLCN1P35523 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC16■□□□□ 0.15
CLCN1P35523 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CLCN1P35523 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16■□□□□ 0.15
CLCN1P35523 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16■□□□□ 0.15
CLCN1P35523 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16■□□□□ 0.15
CLCN1P35523 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CLCN1P35523 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CLCN1P35523 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 CLUHP2-201ENST00000426660 1303 ntBASIC15.99■□□□□ 0.15
CLCN1P35523 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN1P35523 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CLCN1P35523 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN1P35523 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CLCN1P35523 LINC02486-201ENST00000604157 3000 ntBASIC15.99■□□□□ 0.15
CLCN1P35523 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CLCN1P35523 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 AK2P2-201ENST00000439142 405 ntBASIC15.99■□□□□ 0.15
CLCN1P35523 RN7SL752P-201ENST00000463779 287 ntBASIC15.99■□□□□ 0.15
CLCN1P35523 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.99■□□□□ 0.15
CLCN1P35523 AC106760.1-201ENST00000508690 800 ntBASIC15.99■□□□□ 0.15
CLCN1P35523 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 AP001889.1-201ENST00000525414 633 ntBASIC15.99■□□□□ 0.15
CLCN1P35523 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.99■□□□□ 0.15
CLCN1P35523 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN1P35523 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.99■□□□□ 0.15
CLCN1P35523 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 GNRHR2-203ENST00000581100 1187 ntBASIC15.99■□□□□ 0.15
CLCN1P35523 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN1P35523 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.99■□□□□ 0.15
CLCN1P35523 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.99■□□□□ 0.15
CLCN1P35523 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 AC008764.8-201ENST00000623966 2717 ntBASIC15.99■□□□□ 0.15
CLCN1P35523 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN1P35523 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CLCN1P35523 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CLCN1P35523 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN1P35523 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN1P35523 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC15.98■□□□□ 0.15
CLCN1P35523 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CLCN1P35523 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CLCN1P35523 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC15.98■□□□□ 0.15
CLCN1P35523 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.98■□□□□ 0.15
CLCN1P35523 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CLCN1P35523 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CLCN1P35523 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.98■□□□□ 0.15
CLCN1P35523 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC15.98■□□□□ 0.15
CLCN1P35523 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.98■□□□□ 0.15
CLCN1P35523 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms