Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL4P13236 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL4P13236 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL4P13236 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL4P13236 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL4P13236 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL4P13236 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL4P13236 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CCL4P13236 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL4P13236 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CCL4P13236 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL4P13236 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL4P13236 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CCL4P13236 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL4P13236 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CCL4P13236 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 HSPA7-201ENST00000445535 1927 ntBASIC13.08□□□□□ -0.32
CCL4P13236 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CCL4P13236 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 AC106827.1-201ENST00000366454 431 ntBASIC13.08□□□□□ -0.32
CCL4P13236 AF274858.1-201ENST00000406288 372 ntBASIC13.08□□□□□ -0.32
CCL4P13236 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL4P13236 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.08□□□□□ -0.32
CCL4P13236 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC13.08□□□□□ -0.32
CCL4P13236 IFNWP2-201ENST00000431203 580 ntBASIC13.08□□□□□ -0.32
CCL4P13236 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCL4P13236 ALG1L7P-201ENST00000502317 768 ntBASIC13.08□□□□□ -0.32
CCL4P13236 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL4P13236 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.08□□□□□ -0.32
CCL4P13236 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL4P13236 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL4P13236 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL4P13236 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC13.08□□□□□ -0.32
CCL4P13236 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCL4P13236 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCL4P13236 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCL4P13236 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCL4P13236 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCL4P13236 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCL4P13236 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCL4P13236 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CCL4P13236 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
CCL4P13236 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL4P13236 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCL4P13236 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCL4P13236 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL4P13236 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL4P13236 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CCL4P13236 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CCL4P13236 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL4P13236 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL4P13236 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL4P13236 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CCL4P13236 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CCL4P13236 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CCL4P13236 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL4P13236 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL4P13236 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL4P13236 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL4P13236 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL4P13236 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL4P13236 RN7SL605P-201ENST00000577229 281 ntBASIC13.07□□□□□ -0.32
CCL4P13236 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms