Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 AC099521.3-201ENST00000624251 2938 ntBASIC12.7□□□□□ -0.38
FREM3P0C091 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 AC018638.5-201ENST00000450885 754 ntBASIC12.7□□□□□ -0.38
FREM3P0C091 IGHV3-37-201ENST00000518544 340 ntBASIC12.7□□□□□ -0.38
FREM3P0C091 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 AC087392.5-201ENST00000612517 489 ntBASIC12.7□□□□□ -0.38
FREM3P0C091 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 AC006372.4-201ENST00000624122 1543 ntBASIC12.7□□□□□ -0.38
FREM3P0C091 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.7□□□□□ -0.38
FREM3P0C091 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
FREM3P0C091 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.7□□□□□ -0.38
FREM3P0C091 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
FREM3P0C091 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.7□□□□□ -0.38
FREM3P0C091 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 AC073548.1-201ENST00000624088 1882 ntBASIC12.7□□□□□ -0.38
FREM3P0C091 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.7□□□□□ -0.38
FREM3P0C091 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 AC004554.1-201ENST00000422830 1468 ntBASIC12.7□□□□□ -0.38
FREM3P0C091 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.7□□□□□ -0.38
FREM3P0C091 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.7□□□□□ -0.38
FREM3P0C091 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.7□□□□□ -0.38
FREM3P0C091 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC12.7□□□□□ -0.38
FREM3P0C091 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.7□□□□□ -0.38
FREM3P0C091 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.7□□□□□ -0.38
FREM3P0C091 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.7□□□□□ -0.38
FREM3P0C091 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 AC073352.2-201ENST00000609385 439 ntBASIC12.7□□□□□ -0.38
FREM3P0C091 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.7□□□□□ -0.38
FREM3P0C091 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FREM3P0C091 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
FREM3P0C091 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
FREM3P0C091 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.69□□□□□ -0.38
FREM3P0C091 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.69□□□□□ -0.38
FREM3P0C091 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.69□□□□□ -0.38
FREM3P0C091 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.69□□□□□ -0.38
FREM3P0C091 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.69□□□□□ -0.38
FREM3P0C091 KRT18P15-201ENST00000458108 1291 ntBASIC12.69□□□□□ -0.38
FREM3P0C091 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 RPL18AP8-201ENST00000486071 528 ntBASIC12.69□□□□□ -0.38
FREM3P0C091 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.69□□□□□ -0.38
FREM3P0C091 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.69□□□□□ -0.38
FREM3P0C091 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.69□□□□□ -0.38
FREM3P0C091 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.69□□□□□ -0.38
FREM3P0C091 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.69□□□□□ -0.38
FREM3P0C091 AC002044.2-201ENST00000624910 970 ntBASIC12.69□□□□□ -0.38
FREM3P0C091 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
FREM3P0C091 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
FREM3P0C091 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
FREM3P0C091 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.69□□□□□ -0.38
FREM3P0C091 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.69□□□□□ -0.38
FREM3P0C091 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
FREM3P0C091 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FREM3P0C091 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms