Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.65□□□□□ -0.22
KRT6AP02538 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.65□□□□□ -0.22
KRT6AP02538 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
KRT6AP02538 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.65□□□□□ -0.22
KRT6AP02538 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
KRT6AP02538 AC011742.3-201ENST00000439053 820 ntBASIC13.65□□□□□ -0.22
KRT6AP02538 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.65□□□□□ -0.22
KRT6AP02538 EIF4HP1-201ENST00000453115 687 ntBASIC13.65□□□□□ -0.22
KRT6AP02538 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.65□□□□□ -0.22
KRT6AP02538 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.65□□□□□ -0.22
KRT6AP02538 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.65□□□□□ -0.22
KRT6AP02538 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.65□□□□□ -0.22
KRT6AP02538 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.65□□□□□ -0.22
KRT6AP02538 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.65□□□□□ -0.22
KRT6AP02538 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.65□□□□□ -0.22
KRT6AP02538 AC007663.3-201ENST00000609632 465 ntBASIC13.65□□□□□ -0.22
KRT6AP02538 AL096828.3-201ENST00000615354 462 ntBASIC13.65□□□□□ -0.22
KRT6AP02538 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.65□□□□□ -0.22
KRT6AP02538 AC004923.1-202ENST00000642106 209 ntBASIC13.65□□□□□ -0.22
KRT6AP02538 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.65□□□□□ -0.22
KRT6AP02538 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.65□□□□□ -0.22
KRT6AP02538 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.65□□□□□ -0.22
KRT6AP02538 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.65□□□□□ -0.22
KRT6AP02538 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.65□□□□□ -0.22
KRT6AP02538 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.65□□□□□ -0.22
KRT6AP02538 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
KRT6AP02538 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRT6AP02538 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.65□□□□□ -0.22
KRT6AP02538 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 AC114271.1-201ENST00000612689 2813 ntBASIC13.64□□□□□ -0.23
KRT6AP02538 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
KRT6AP02538 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
KRT6AP02538 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.64□□□□□ -0.23
KRT6AP02538 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 CHCHD2P2-201ENST00000503744 321 ntBASIC13.64□□□□□ -0.23
KRT6AP02538 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 AC119751.2-201ENST00000504529 210 ntBASIC13.64□□□□□ -0.23
KRT6AP02538 AC106794.1-201ENST00000506935 792 ntBASIC13.64□□□□□ -0.23
KRT6AP02538 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.64□□□□□ -0.23
KRT6AP02538 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 AC090164.2-201ENST00000611487 516 ntBASIC13.64□□□□□ -0.23
KRT6AP02538 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.64□□□□□ -0.23
KRT6AP02538 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.64□□□□□ -0.23
KRT6AP02538 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRT6AP02538 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms