Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GPC4O75487 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.14□□□□□ -0.15
GPC4O75487 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.14□□□□□ -0.15
GPC4O75487 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.14□□□□□ -0.15
GPC4O75487 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GPC4O75487 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.14□□□□□ -0.15
GPC4O75487 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.14□□□□□ -0.15
GPC4O75487 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.14□□□□□ -0.15
GPC4O75487 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GPC4O75487 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.14□□□□□ -0.15
GPC4O75487 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.14□□□□□ -0.15
GPC4O75487 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.14□□□□□ -0.15
GPC4O75487 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.14□□□□□ -0.15
GPC4O75487 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.14□□□□□ -0.15
GPC4O75487 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GPC4O75487 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.14□□□□□ -0.15
GPC4O75487 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GPC4O75487 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GPC4O75487 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GPC4O75487 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 LINC02486-201ENST00000604157 3000 ntBASIC14.13□□□□□ -0.15
GPC4O75487 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GPC4O75487 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.13□□□□□ -0.15
GPC4O75487 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GPC4O75487 USP17L6P-201ENST00000382470 1197 ntBASIC14.13□□□□□ -0.15
GPC4O75487 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.13□□□□□ -0.15
GPC4O75487 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.13□□□□□ -0.15
GPC4O75487 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.13□□□□□ -0.15
GPC4O75487 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.13□□□□□ -0.15
GPC4O75487 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.13□□□□□ -0.15
GPC4O75487 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GPC4O75487 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.13□□□□□ -0.15
GPC4O75487 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GPC4O75487 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
GPC4O75487 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.12□□□□□ -0.15
GPC4O75487 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms