Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 RN7SL81P-201ENST00000493781 261 ntBASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 AC023794.5-201ENST00000564380 2157 ntBASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 AL031713.1-201ENST00000564813 661 ntBASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 AC084781.1-201ENST00000613737 656 ntBASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 AP001184.1-201ENST00000637936 376 ntBASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLIP2Q9UDT6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 AC006987.1-201ENST00000413610 527 ntBASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 AC008267.1-201ENST00000474858 1069 ntBASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 ORAOV1P1-201ENST00000503108 395 ntBASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 AC005740.1-201ENST00000515639 522 ntBASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 NDUFB10P1-201ENST00000567319 521 ntBASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 AL133467.4-201ENST00000602953 725 ntBASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 FAM90A12P-201ENST00000519497 2375 ntBASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 FAM90A24P-201ENST00000520792 2369 ntBASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 TCAM1P-207ENST00000485295 1537 ntBASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLIP2Q9UDT6 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.64■□□□□ 0.26
CLIP2Q9UDT6 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CLIP2Q9UDT6 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CLIP2Q9UDT6 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLIP2Q9UDT6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms