Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FYCO1Q9BQS8 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 RN7SKP255-201ENST00000363442 313 ntBASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 RN7SKP203-201ENST00000363618 332 ntBASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 RN7SKP71-201ENST00000364558 318 ntBASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 7SK.1-201ENST00000365328 331 ntBASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 MARK2P17-201ENST00000498560 841 ntBASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 AC008622.3-201ENST00000621170 600 ntBASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC21.06■□□□□ 0.96
FYCO1Q9BQS8 POM121L4P-202ENST00000427789 1891 ntBASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 Z97653.2-201ENST00000623057 1418 ntBASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 KRT18P44-201ENST00000416086 1285 ntBASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 RNLS-203ENST00000437752 525 ntTSL 2 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 AC147876.1-201ENST00000504408 322 ntBASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 IGHVII-33-1-201ENST00000524010 280 ntBASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 MIR4254-201ENST00000581063 76 ntBASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC21.05■□□□□ 0.96
FYCO1Q9BQS8 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 AC135506.1-201ENST00000603877 1799 ntBASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 DDC-214ENST00000622873 1839 ntTSL 3 BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 AC114781.1-201ENST00000450559 1028 ntBASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 AC023906.1-201ENST00000486386 453 ntBASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 RN7SL524P-201ENST00000581152 300 ntBASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 AC011462.4-201ENST00000616866 449 ntBASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 AC245369.7-201ENST00000631386 350 ntBASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 PKD1P1-201ENST00000458669 6805 ntBASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 GOLGA8DP-202ENST00000341390 2184 ntBASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
FYCO1Q9BQS8 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FYCO1Q9BQS8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms