Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 CAP2-207ENST00000493172 861 ntTSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AC023908.3-201ENST00000564211 3047 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AC110753.1-201ENST00000505711 1022 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 AC010442.2-201ENST00000509301 407 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 BCRP5-201ENST00000514371 253 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 SLC25A51P3-201ENST00000521814 889 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 RPL30-213ENST00000523172 274 ntTSL 5 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 MIR941-1-201ENST00000636396 72 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 MECP2-226ENST00000640414 897 ntTSL 5 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 SNX18-202ENST00000343017 3140 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AL021407.3-201ENST00000407522 486 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 MESTP4-201ENST00000412333 1204 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 AL133517.1-201ENST00000413412 748 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 ZSCAN5DP-201ENST00000600684 1488 ntBASIC9□□□□□ -0.97
ALMS1Q8TCU4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 OR7E122P-201ENST00000383606 1017 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 CNN2P1-201ENST00000453616 918 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 SLC25A5P6-201ENST00000515328 886 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 MIR4763-201ENST00000581461 92 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 OR2A15P-201ENST00000463814 900 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 ST3GAL1P1-201ENST00000513810 1014 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms