Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN20P56880 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.92□□□□□ -0.34
CLDN20P56880 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN20P56880 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN20P56880 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CLDN20P56880 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN20P56880 PDIA3P2-201ENST00000428073 158 ntBASIC12.92□□□□□ -0.34
CLDN20P56880 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN20P56880 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.92□□□□□ -0.34
CLDN20P56880 RN7SL277P-201ENST00000481521 288 ntBASIC12.92□□□□□ -0.34
CLDN20P56880 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.92□□□□□ -0.34
CLDN20P56880 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN20P56880 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN20P56880 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN20P56880 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.92□□□□□ -0.34
CLDN20P56880 AC020922.3-201ENST00000595064 547 ntBASIC12.92□□□□□ -0.34
CLDN20P56880 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN20P56880 AL022334.2-201ENST00000610000 484 ntBASIC12.92□□□□□ -0.34
CLDN20P56880 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN20P56880 AF254983.2-201ENST00000612331 135 ntBASIC12.92□□□□□ -0.34
CLDN20P56880 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.92□□□□□ -0.34
CLDN20P56880 AC091812.3-201ENST00000621362 345 ntBASIC12.92□□□□□ -0.34
CLDN20P56880 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 CCT8L1P-201ENST00000465400 1674 ntBASIC12.92□□□□□ -0.34
CLDN20P56880 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CLDN20P56880 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CLDN20P56880 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CLDN20P56880 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
CLDN20P56880 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN20P56880 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 AL365181.3-201ENST00000605886 3222 ntBASIC12.91□□□□□ -0.34
CLDN20P56880 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDN20P56880 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLDN20P56880 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDN20P56880 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDN20P56880 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLDN20P56880 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDN20P56880 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDN20P56880 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDN20P56880 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDN20P56880 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDN20P56880 POU5F1P2-201ENST00000521750 823 ntBASIC12.91□□□□□ -0.34
CLDN20P56880 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDN20P56880 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms