Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC15.4■□□□□ 0.06
CDK7P50613 GGNBP1-204ENST00000613113 887 ntBASIC15.4■□□□□ 0.06
CDK7P50613 AC011462.4-201ENST00000616866 449 ntBASIC15.4■□□□□ 0.06
CDK7P50613 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.4■□□□□ 0.06
CDK7P50613 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDK7P50613 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.4■□□□□ 0.06
CDK7P50613 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDK7P50613 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDK7P50613 SALL4P6-201ENST00000429385 1691 ntBASIC15.4■□□□□ 0.06
CDK7P50613 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.4■□□□□ 0.06
CDK7P50613 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDK7P50613 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDK7P50613 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.4■□□□□ 0.06
CDK7P50613 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.4■□□□□ 0.06
CDK7P50613 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDK7P50613 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.4■□□□□ 0.06
CDK7P50613 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDK7P50613 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDK7P50613 AC020931.1-201ENST00000589622 1346 ntBASIC15.4■□□□□ 0.06
CDK7P50613 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDK7P50613 AC015909.5-201ENST00000624336 2266 ntBASIC15.4■□□□□ 0.06
CDK7P50613 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.4■□□□□ 0.06
CDK7P50613 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDK7P50613 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.39■□□□□ 0.05
CDK7P50613 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.39■□□□□ 0.05
CDK7P50613 DKKL1P1-201ENST00000400550 698 ntBASIC15.39■□□□□ 0.05
CDK7P50613 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.39■□□□□ 0.05
CDK7P50613 RN7SL351P-201ENST00000469306 248 ntBASIC15.39■□□□□ 0.05
CDK7P50613 IGHEP1-201ENST00000521393 651 ntBASIC15.39■□□□□ 0.05
CDK7P50613 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.39■□□□□ 0.05
CDK7P50613 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 AC008536.3-201ENST00000623282 1599 ntBASIC15.39■□□□□ 0.05
CDK7P50613 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDK7P50613 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CDK7P50613 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDK7P50613 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.38■□□□□ 0.05
CDK7P50613 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDK7P50613 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDK7P50613 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDK7P50613 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.38■□□□□ 0.05
CDK7P50613 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDK7P50613 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDK7P50613 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDK7P50613 CTSL-202ENST00000342020 933 ntTSL 2 BASIC15.38■□□□□ 0.05
CDK7P50613 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.38■□□□□ 0.05
CDK7P50613 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.38■□□□□ 0.05
CDK7P50613 AC004522.1-201ENST00000419978 654 ntBASIC15.38■□□□□ 0.05
CDK7P50613 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CDK7P50613 BCL2L12P1-201ENST00000508390 733 ntBASIC15.38■□□□□ 0.05
CDK7P50613 AC113347.2-201ENST00000512350 279 ntBASIC15.38■□□□□ 0.05
CDK7P50613 MIR2278-201ENST00000516344 96 ntBASIC15.38■□□□□ 0.05
CDK7P50613 AC004801.1-201ENST00000549557 360 ntBASIC15.38■□□□□ 0.05
CDK7P50613 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.38■□□□□ 0.05
CDK7P50613 MIR4746-201ENST00000579802 71 ntBASIC15.38■□□□□ 0.05
CDK7P50613 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CDK7P50613 AC004686.1-201ENST00000605113 538 ntBASIC15.38■□□□□ 0.05
CDK7P50613 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.38■□□□□ 0.05
CDK7P50613 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDK7P50613 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDK7P50613 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDK7P50613 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC15.38■□□□□ 0.05
CDK7P50613 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.38■□□□□ 0.05
CDK7P50613 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDK7P50613 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDK7P50613 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CDK7P50613 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.38■□□□□ 0.05
CDK7P50613 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CDK7P50613 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.38■□□□□ 0.05
CDK7P50613 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.38■□□□□ 0.05
CDK7P50613 AL022313.4-201ENST00000562756 2046 ntBASIC15.38■□□□□ 0.05
CDK7P50613 AC117489.1-201ENST00000625169 3217 ntBASIC15.38■□□□□ 0.05
CDK7P50613 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDK7P50613 AC097376.2-205ENST00000610159 5334 ntBASIC15.37■□□□□ 0.05
CDK7P50613 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDK7P50613 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.37■□□□□ 0.05
CDK7P50613 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDK7P50613 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDK7P50613 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
CDK7P50613 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms