Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPS1P31327 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPS1P31327 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPS1P31327 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC19.08■□□□□ 0.64
CPS1P31327 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC19.08■□□□□ 0.64
CPS1P31327 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPS1P31327 AL109983.1-201ENST00000603234 646 ntBASIC19.08■□□□□ 0.64
CPS1P31327 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC19.08■□□□□ 0.64
CPS1P31327 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC19.08■□□□□ 0.64
CPS1P31327 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPS1P31327 GOLGA8IP-202ENST00000611635 2100 ntBASIC19.08■□□□□ 0.64
CPS1P31327 CROT-203ENST00000419147 2959 ntTSL 2 BASIC19.08■□□□□ 0.64
CPS1P31327 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CPS1P31327 TCAM1P-207ENST00000485295 1537 ntBASIC19.08■□□□□ 0.64
CPS1P31327 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC19.08■□□□□ 0.64
CPS1P31327 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CPS1P31327 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 CA6-205ENST00000480186 1493 ntTSL 2 BASIC19.07■□□□□ 0.64
CPS1P31327 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 AC034205.3-201ENST00000603595 1376 ntBASIC19.07■□□□□ 0.64
CPS1P31327 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CPS1P31327 DDC-213ENST00000617822 1809 ntTSL 3 BASIC19.07■□□□□ 0.64
CPS1P31327 OR7E122P-201ENST00000383606 1017 ntBASIC19.07■□□□□ 0.64
CPS1P31327 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC19.07■□□□□ 0.64
CPS1P31327 TULP3P1-202ENST00000453253 1291 ntBASIC19.07■□□□□ 0.64
CPS1P31327 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC19.07■□□□□ 0.64
CPS1P31327 EEF1GP1-201ENST00000457231 1299 ntBASIC19.07■□□□□ 0.64
CPS1P31327 HNRNPA1P7-201ENST00000521273 963 ntBASIC19.07■□□□□ 0.64
CPS1P31327 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
CPS1P31327 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC19.07■□□□□ 0.64
CPS1P31327 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CPS1P31327 CYP4F10P-201ENST00000589560 752 ntBASIC19.07■□□□□ 0.64
CPS1P31327 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CPS1P31327 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC19.07■□□□□ 0.64
CPS1P31327 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.07■□□□□ 0.64
CPS1P31327 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CPS1P31327 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CPS1P31327 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CPS1P31327 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPS1P31327 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC19.06■□□□□ 0.64
CPS1P31327 AL139424.2-202ENST00000641335 1369 ntBASIC19.06■□□□□ 0.64
CPS1P31327 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC19.06■□□□□ 0.64
CPS1P31327 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CPS1P31327 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC19.06■□□□□ 0.64
CPS1P31327 BICD1P1-201ENST00000457832 1222 ntBASIC19.06■□□□□ 0.64
CPS1P31327 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC19.06■□□□□ 0.64
CPS1P31327 HNRNPA1P4-201ENST00000509706 756 ntBASIC19.06■□□□□ 0.64
CPS1P31327 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC19.06■□□□□ 0.64
CPS1P31327 DDX11L8-201ENST00000535849 366 ntBASIC19.06■□□□□ 0.64
CPS1P31327 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC19.06■□□□□ 0.64
CPS1P31327 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC19.06■□□□□ 0.64
CPS1P31327 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC19.06■□□□□ 0.64
CPS1P31327 AC007274.3-201ENST00000619838 385 ntBASIC19.06■□□□□ 0.64
CPS1P31327 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC19.06■□□□□ 0.64
CPS1P31327 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC19.06■□□□□ 0.64
CPS1P31327 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC19.06■□□□□ 0.64
CPS1P31327 MECP2-226ENST00000640414 897 ntTSL 5 BASIC19.06■□□□□ 0.64
CPS1P31327 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
CPS1P31327 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC19.06■□□□□ 0.64
CPS1P31327 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CPS1P31327 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CPS1P31327 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CPS1P31327 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CPS1P31327 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPS1P31327 OR6D1P-202ENST00000641007 5290 ntBASIC19.06■□□□□ 0.64
CPS1P31327 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC19.06■□□□□ 0.64
CPS1P31327 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.05■□□□□ 0.64
CPS1P31327 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPS1P31327 MGST3-204ENST00000367888 778 ntTSL 3 BASIC19.05■□□□□ 0.64
CPS1P31327 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC19.05■□□□□ 0.64
CPS1P31327 TFAM-201ENST00000373895 973 ntTSL 2 BASIC19.05■□□□□ 0.64
CPS1P31327 AL356583.3-201ENST00000412354 417 ntBASIC19.05■□□□□ 0.64
CPS1P31327 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPS1P31327 AC007690.1-201ENST00000451924 468 ntBASIC19.05■□□□□ 0.64
CPS1P31327 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPS1P31327 AC007622.1-201ENST00000488371 535 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms