Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.1□□□□□ -0.31
PRKCAP17252 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PRKCAP17252 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
PRKCAP17252 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
PRKCAP17252 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
PRKCAP17252 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.1□□□□□ -0.31
PRKCAP17252 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.1□□□□□ -0.31
PRKCAP17252 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.1□□□□□ -0.31
PRKCAP17252 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.1□□□□□ -0.31
PRKCAP17252 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.1□□□□□ -0.31
PRKCAP17252 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.1□□□□□ -0.31
PRKCAP17252 AC078875.1-201ENST00000431907 724 ntBASIC13.1□□□□□ -0.31
PRKCAP17252 XBP1P1-201ENST00000436573 652 ntBASIC13.1□□□□□ -0.31
PRKCAP17252 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.1□□□□□ -0.31
PRKCAP17252 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.1□□□□□ -0.31
PRKCAP17252 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.1□□□□□ -0.31
PRKCAP17252 AC044849.1-201ENST00000519737 1188 ntBASIC13.1□□□□□ -0.31
PRKCAP17252 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.1□□□□□ -0.31
PRKCAP17252 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.1□□□□□ -0.31
PRKCAP17252 AL591471.1-201ENST00000621855 229 ntBASIC13.1□□□□□ -0.31
PRKCAP17252 AC092299.1-201ENST00000632679 757 ntBASIC13.1□□□□□ -0.31
PRKCAP17252 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
PRKCAP17252 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.1□□□□□ -0.31
PRKCAP17252 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PRKCAP17252 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.1□□□□□ -0.31
PRKCAP17252 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.1□□□□□ -0.31
PRKCAP17252 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 AC004899.2-201ENST00000622993 3860 ntBASIC13.1□□□□□ -0.31
PRKCAP17252 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
PRKCAP17252 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRKCAP17252 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.09□□□□□ -0.31
PRKCAP17252 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.09□□□□□ -0.31
PRKCAP17252 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.09□□□□□ -0.31
PRKCAP17252 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PRKCAP17252 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
PRKCAP17252 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
PRKCAP17252 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
PRKCAP17252 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 AC006033.1-201ENST00000440505 426 ntBASIC13.09□□□□□ -0.31
PRKCAP17252 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.09□□□□□ -0.31
PRKCAP17252 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.09□□□□□ -0.31
PRKCAP17252 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
PRKCAP17252 AC009779.1-201ENST00000551138 283 ntBASIC13.09□□□□□ -0.31
PRKCAP17252 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.09□□□□□ -0.31
PRKCAP17252 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.09□□□□□ -0.31
PRKCAP17252 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.09□□□□□ -0.31
PRKCAP17252 AL132994.2-201ENST00000603120 687 ntBASIC13.09□□□□□ -0.31
PRKCAP17252 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.09□□□□□ -0.31
PRKCAP17252 MIR6869-201ENST00000619434 62 ntBASIC13.09□□□□□ -0.31
PRKCAP17252 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
PRKCAP17252 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PRKCAP17252 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.09□□□□□ -0.31
PRKCAP17252 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRKCAP17252 CICP1-201ENST00000416803 2410 ntBASIC13.09□□□□□ -0.31
PRKCAP17252 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.09□□□□□ -0.31
PRKCAP17252 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.08□□□□□ -0.31
PRKCAP17252 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
PRKCAP17252 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PRKCAP17252 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms