Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 MARK2P16-201ENST00000605714 1723 ntBASIC12.57□□□□□ -0.4
SSR3Q9UNL2 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSR3Q9UNL2 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AC124319.4-201ENST00000622931 2161 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 ACKR1-201ENST00000368121 1240 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 RN7SKP175-201ENST00000408472 289 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AC107890.1-201ENST00000422478 521 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 MEP1AP4-201ENST00000423244 1087 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AL442647.2-201ENST00000429864 857 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AC009477.1-201ENST00000452936 217 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AL391280.1-201ENST00000506969 1062 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AC023310.3-201ENST00000557027 670 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AC100756.1-201ENST00000562736 682 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AC138749.3-201ENST00000567691 622 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AC116165.1-201ENST00000611806 668 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 Z92544.3-201ENST00000624747 417 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AC009093.2-202ENST00000620513 2079 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AL845472.1-202ENST00000624675 4080 ntBASIC12.56□□□□□ -0.4
SSR3Q9UNL2 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSR3Q9UNL2 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 LAP3P2-201ENST00000454686 1454 ntBASIC12.55□□□□□ -0.4
SSR3Q9UNL2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms