Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
LINC00474Q9P2X8 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 LPO-204ENST00000543544 2350 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AC102953.2-201ENST00000609755 3026 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 CSH2-202ENST00000345366 598 ntTSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 KRTAP10-13P-201ENST00000412914 571 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AC011742.3-201ENST00000439053 820 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AL645933.1-201ENST00000440087 609 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 GOLGA2P4-201ENST00000441462 777 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AL591846.1-201ENST00000451736 433 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 BNIP3P13-201ENST00000599968 566 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AC100757.4-201ENST00000626934 759 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AC004923.1-202ENST00000642106 209 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 BX640514.1-201ENST00000583223 1918 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AC144522.1-201ENST00000625111 1658 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 MEX3B-202ENST00000558133 4333 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AL590824.1-201ENST00000403828 1349 ntBASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 GRN-222ENST00000639447 1314 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms