Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDLIM5Q96HC4 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 KRT8P18-201ENST00000413425 1445 ntBASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 FAM86MP-201ENST00000340703 885 ntBASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 AC006335.1-201ENST00000445200 547 ntBASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 COQ10BP2-201ENST00000513804 724 ntBASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDLIM5Q96HC4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 AC138761.6-201ENST00000583997 1423 ntBASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 MIR4538-201ENST00000581377 78 ntBASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 NDUFV2P1-201ENST00000596415 907 ntBASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms