Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 PSMD4P1-201ENST00000433951 1109 ntBASIC12.64□□□□□ -0.39
PHF3Q92576 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.64□□□□□ -0.39
PHF3Q92576 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.64□□□□□ -0.39
PHF3Q92576 NDUFB10P1-201ENST00000567319 521 ntBASIC12.64□□□□□ -0.39
PHF3Q92576 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.64□□□□□ -0.39
PHF3Q92576 MIR6756-201ENST00000616240 63 ntBASIC12.64□□□□□ -0.39
PHF3Q92576 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
PHF3Q92576 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.64□□□□□ -0.39
PHF3Q92576 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.64□□□□□ -0.39
PHF3Q92576 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
PHF3Q92576 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
PHF3Q92576 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.64□□□□□ -0.39
PHF3Q92576 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.64□□□□□ -0.39
PHF3Q92576 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.64□□□□□ -0.39
PHF3Q92576 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.64□□□□□ -0.39
PHF3Q92576 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.64□□□□□ -0.39
PHF3Q92576 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 ALG1L6P-201ENST00000515248 758 ntBASIC12.64□□□□□ -0.39
PHF3Q92576 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.64□□□□□ -0.39
PHF3Q92576 SNORD3B-1-201ENST00000577988 758 ntBASIC12.64□□□□□ -0.39
PHF3Q92576 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 SIGLEC22P-201ENST00000599104 714 ntBASIC12.64□□□□□ -0.39
PHF3Q92576 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.64□□□□□ -0.39
PHF3Q92576 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.64□□□□□ -0.39
PHF3Q92576 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
PHF3Q92576 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.64□□□□□ -0.39
PHF3Q92576 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PHF3Q92576 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.63□□□□□ -0.39
PHF3Q92576 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.63□□□□□ -0.39
PHF3Q92576 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.63□□□□□ -0.39
PHF3Q92576 NCLP1-201ENST00000445357 1963 ntBASIC12.63□□□□□ -0.39
PHF3Q92576 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PHF3Q92576 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.63□□□□□ -0.39
PHF3Q92576 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PHF3Q92576 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PHF3Q92576 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.63□□□□□ -0.39
PHF3Q92576 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.63□□□□□ -0.39
PHF3Q92576 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.63□□□□□ -0.39
PHF3Q92576 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.63□□□□□ -0.39
PHF3Q92576 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
PHF3Q92576 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.63□□□□□ -0.39
PHF3Q92576 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
PHF3Q92576 KRT8P2-201ENST00000556193 944 ntBASIC12.63□□□□□ -0.39
PHF3Q92576 TRMT112P3-201ENST00000580149 358 ntBASIC12.63□□□□□ -0.39
PHF3Q92576 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
PHF3Q92576 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.63□□□□□ -0.39
PHF3Q92576 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PHF3Q92576 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
PHF3Q92576 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PHF3Q92576 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.63□□□□□ -0.39
PHF3Q92576 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.63□□□□□ -0.39
PHF3Q92576 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
PHF3Q92576 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms