Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 AC005562.1-201ENST00000583030 3219 ntBASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 AC008132.1-202ENST00000342005 1389 ntBASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 PTENP1-202ENST00000532280 3996 ntBASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 BANF1P3-201ENST00000412556 261 ntBASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 IMP3P2-201ENST00000489760 475 ntBASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 AL139424.3-202ENST00000641619 917 ntBASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 AC004241.5-201ENST00000623870 2448 ntBASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 MARK2P16-201ENST00000605714 1723 ntBASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDH19Q8TAB3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 Z98885.3-201ENST00000624882 1757 ntBASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 AC073150.1-201ENST00000450406 1084 ntBASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 AC024681.1-201ENST00000521917 487 ntBASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 AC079328.1-201ENST00000560358 952 ntBASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDH19Q8TAB3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms