Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 ANKRD19P-201ENST00000338192 862 ntBASIC13.12□□□□□ -0.31
REEP3Q6NUK4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 EIF4HP1-201ENST00000453115 687 ntBASIC13.12□□□□□ -0.31
REEP3Q6NUK4 RNMTL1P1-201ENST00000454103 560 ntBASIC13.12□□□□□ -0.31
REEP3Q6NUK4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 AC005730.2-201ENST00000564549 1184 ntBASIC13.12□□□□□ -0.31
REEP3Q6NUK4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 ZNF493-208ENST00000599461 1769 ntBASIC13.12□□□□□ -0.31
REEP3Q6NUK4 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 BEND3P3-201ENST00000611030 2440 ntBASIC13.11□□□□□ -0.31
REEP3Q6NUK4 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 MTX1P1-201ENST00000440904 838 ntBASIC13.11□□□□□ -0.31
REEP3Q6NUK4 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.11□□□□□ -0.31
REEP3Q6NUK4 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 AC093462.1-201ENST00000621167 1683 ntBASIC13.11□□□□□ -0.31
REEP3Q6NUK4 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
REEP3Q6NUK4 AC010970.1-201ENST00000445125 1848 ntBASIC13.11□□□□□ -0.31
REEP3Q6NUK4 AC026271.4-201ENST00000578214 1833 ntBASIC13.11□□□□□ -0.31
REEP3Q6NUK4 POM121L14P-201ENST00000406100 1558 ntBASIC13.11□□□□□ -0.31
REEP3Q6NUK4 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms