Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 AL359845.1-201ENST00000458202 1648 ntBASIC15.29■□□□□ 0.04
NCKAP1LP55160 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 AC092506.1-202ENST00000401022 528 ntBASIC15.29■□□□□ 0.04
NCKAP1LP55160 GGTLC4P-201ENST00000402176 664 ntBASIC15.29■□□□□ 0.04
NCKAP1LP55160 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 HERC2P11-201ENST00000562845 725 ntBASIC15.29■□□□□ 0.04
NCKAP1LP55160 AC100756.2-201ENST00000569537 736 ntBASIC15.29■□□□□ 0.04
NCKAP1LP55160 SNORD3B-1-201ENST00000577988 758 ntBASIC15.29■□□□□ 0.04
NCKAP1LP55160 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 AC007881.3-201ENST00000608897 607 ntBASIC15.29■□□□□ 0.04
NCKAP1LP55160 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.29■□□□□ 0.04
NCKAP1LP55160 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1LP55160 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NCKAP1LP55160 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 AC135782.3-201ENST00000562782 2105 ntBASIC15.28■□□□□ 0.04
NCKAP1LP55160 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.28■□□□□ 0.04
NCKAP1LP55160 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 AC245140.2-201ENST00000624054 1939 ntBASIC15.28■□□□□ 0.04
NCKAP1LP55160 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 MIR1307-201ENST00000408840 149 ntBASIC15.28■□□□□ 0.04
NCKAP1LP55160 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 FTLP1-201ENST00000449155 526 ntBASIC15.28■□□□□ 0.04
NCKAP1LP55160 NOC2LP1-201ENST00000450578 752 ntBASIC15.28■□□□□ 0.04
NCKAP1LP55160 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 AC007250.1-201ENST00000608934 338 ntBASIC15.28■□□□□ 0.04
NCKAP1LP55160 AC087392.5-201ENST00000612517 489 ntBASIC15.28■□□□□ 0.04
NCKAP1LP55160 AL805961.1-201ENST00000642026 753 ntBASIC15.28■□□□□ 0.04
NCKAP1LP55160 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NCKAP1LP55160 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1LP55160 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms