Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HTR1AP08908 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
HTR1AP08908 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HTR1AP08908 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HTR1AP08908 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
HTR1AP08908 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HTR1AP08908 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HTR1AP08908 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
HTR1AP08908 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
HTR1AP08908 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.83□□□□□ -0.35
HTR1AP08908 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HTR1AP08908 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.35
HTR1AP08908 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.83□□□□□ -0.35
HTR1AP08908 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
HTR1AP08908 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HTR1AP08908 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HTR1AP08908 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.83□□□□□ -0.36
HTR1AP08908 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 AC087499.6-201ENST00000411576 835 ntBASIC12.83□□□□□ -0.36
HTR1AP08908 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.83□□□□□ -0.36
HTR1AP08908 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.83□□□□□ -0.36
HTR1AP08908 AC093433.1-201ENST00000458048 571 ntBASIC12.83□□□□□ -0.36
HTR1AP08908 KRT18P15-201ENST00000458108 1291 ntBASIC12.83□□□□□ -0.36
HTR1AP08908 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.83□□□□□ -0.36
HTR1AP08908 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.83□□□□□ -0.36
HTR1AP08908 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.83□□□□□ -0.36
HTR1AP08908 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.83□□□□□ -0.36
HTR1AP08908 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.83□□□□□ -0.36
HTR1AP08908 AC009486.1-201ENST00000569860 813 ntBASIC12.83□□□□□ -0.36
HTR1AP08908 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.83□□□□□ -0.36
HTR1AP08908 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.83□□□□□ -0.36
HTR1AP08908 AC009118.2-201ENST00000613275 655 ntBASIC12.83□□□□□ -0.36
HTR1AP08908 AC106028.4-201ENST00000614509 607 ntBASIC12.83□□□□□ -0.36
HTR1AP08908 ENPP7P14-201ENST00000621765 1040 ntBASIC12.83□□□□□ -0.36
HTR1AP08908 CU634019.7-201ENST00000624153 1185 ntBASIC12.83□□□□□ -0.36
HTR1AP08908 FP236241.2-201ENST00000624906 1185 ntBASIC12.83□□□□□ -0.36
HTR1AP08908 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.83□□□□□ -0.36
HTR1AP08908 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.83□□□□□ -0.36
HTR1AP08908 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.83□□□□□ -0.36
HTR1AP08908 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HTR1AP08908 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HTR1AP08908 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HTR1AP08908 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.83□□□□□ -0.36
HTR1AP08908 DNM1P41-201ENST00000623634 3350 ntBASIC12.83□□□□□ -0.36
HTR1AP08908 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 MARK2P16-201ENST00000605714 1723 ntBASIC12.82□□□□□ -0.36
HTR1AP08908 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.82□□□□□ -0.36
HTR1AP08908 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HTR1AP08908 AC022497.1-201ENST00000624916 3691 ntBASIC12.82□□□□□ -0.36
HTR1AP08908 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HTR1AP08908 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HTR1AP08908 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HTR1AP08908 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms