Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AQP7P5-201ENST00000428759 1049 ntBASIC15.28■□□□□ 0.04
VTNP04004 AQP7P4-201ENST00000447083 1042 ntBASIC15.28■□□□□ 0.04
VTNP04004 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.28■□□□□ 0.04
VTNP04004 AQP7P2-201ENST00000453967 1041 ntBASIC15.28■□□□□ 0.04
VTNP04004 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.28■□□□□ 0.04
VTNP04004 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.28■□□□□ 0.04
VTNP04004 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.28■□□□□ 0.04
VTNP04004 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.28■□□□□ 0.04
VTNP04004 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.28■□□□□ 0.04
VTNP04004 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.28■□□□□ 0.04
VTNP04004 MIR4326-201ENST00000582203 59 ntBASIC15.28■□□□□ 0.04
VTNP04004 AC073592.2-201ENST00000623062 780 ntBASIC15.28■□□□□ 0.04
VTNP04004 AQP7P3-201ENST00000624547 1041 ntBASIC15.28■□□□□ 0.04
VTNP04004 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.28■□□□□ 0.04
VTNP04004 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.28■□□□□ 0.04
VTNP04004 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.28■□□□□ 0.04
VTNP04004 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
VTNP04004 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VTNP04004 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.27■□□□□ 0.04
VTNP04004 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VTNP04004 AC111170.3-201ENST00000624282 2464 ntBASIC15.27■□□□□ 0.04
VTNP04004 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
VTNP04004 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.27■□□□□ 0.04
VTNP04004 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.27■□□□□ 0.04
VTNP04004 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.27■□□□□ 0.04
VTNP04004 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
VTNP04004 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.27■□□□□ 0.04
VTNP04004 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.27■□□□□ 0.04
VTNP04004 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
VTNP04004 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VTNP04004 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.27■□□□□ 0.04
VTNP04004 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VTNP04004 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.27■□□□□ 0.04
VTNP04004 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC15.27■□□□□ 0.04
VTNP04004 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.27■□□□□ 0.04
VTNP04004 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
VTNP04004 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.27■□□□□ 0.04
VTNP04004 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.27■□□□□ 0.04
VTNP04004 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.27■□□□□ 0.04
VTNP04004 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VTNP04004 AC008972.2-201ENST00000606587 494 ntBASIC15.27■□□□□ 0.04
VTNP04004 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC15.27■□□□□ 0.04
VTNP04004 AC138466.4-201ENST00000623965 852 ntBASIC15.27■□□□□ 0.04
VTNP04004 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.27■□□□□ 0.04
VTNP04004 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VTNP04004 AC002472.4-201ENST00000641915 272 ntBASIC15.27■□□□□ 0.04
VTNP04004 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VTNP04004 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VTNP04004 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VTNP04004 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
VTNP04004 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
VTNP04004 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VTNP04004 NRADDP-202ENST00000641269 1585 ntBASIC15.27■□□□□ 0.03
VTNP04004 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VTNP04004 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VTNP04004 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.27■□□□□ 0.03
VTNP04004 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
VTNP04004 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
VTNP04004 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.26■□□□□ 0.03
VTNP04004 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
VTNP04004 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VTNP04004 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VTNP04004 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.26■□□□□ 0.03
VTNP04004 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.26■□□□□ 0.03
VTNP04004 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 AC024293.1-201ENST00000467930 498 ntBASIC15.26■□□□□ 0.03
VTNP04004 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.26■□□□□ 0.03
VTNP04004 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.26■□□□□ 0.03
VTNP04004 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.26■□□□□ 0.03
VTNP04004 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VTNP04004 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VTNP04004 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms