Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.54□□□□□ -0.4
APOC1P02654 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.54□□□□□ -0.4
APOC1P02654 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 AC073548.1-201ENST00000624088 1882 ntBASIC12.54□□□□□ -0.4
APOC1P02654 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.54□□□□□ -0.4
APOC1P02654 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
APOC1P02654 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.54□□□□□ -0.4
APOC1P02654 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOC1P02654 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC1P02654 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC1P02654 AC103592.1-201ENST00000394513 664 ntBASIC12.53□□□□□ -0.4
APOC1P02654 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC1P02654 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 GAPDHP21-201ENST00000450301 1010 ntBASIC12.53□□□□□ -0.4
APOC1P02654 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC1P02654 CROCCP4-201ENST00000457096 498 ntBASIC12.53□□□□□ -0.4
APOC1P02654 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APOC1P02654 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.53□□□□□ -0.4
APOC1P02654 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC1P02654 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.53□□□□□ -0.4
APOC1P02654 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC1P02654 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
APOC1P02654 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC1P02654 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
APOC1P02654 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.52□□□□□ -0.4
APOC1P02654 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
APOC1P02654 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC1P02654 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.52□□□□□ -0.4
APOC1P02654 AC092117.1-201ENST00000621230 3250 ntBASIC12.52□□□□□ -0.4
APOC1P02654 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.52□□□□□ -0.4
APOC1P02654 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOC1P02654 AC130686.1-201ENST00000622936 2466 ntBASIC12.52□□□□□ -0.4
APOC1P02654 AC111170.3-201ENST00000624282 2464 ntBASIC12.52□□□□□ -0.4
APOC1P02654 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
APOC1P02654 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.52□□□□□ -0.4
APOC1P02654 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOC1P02654 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
APOC1P02654 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC1P02654 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC1P02654 CCT8L1P-201ENST00000465400 1674 ntBASIC12.52□□□□□ -0.4
APOC1P02654 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC1P02654 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.52□□□□□ -0.4
APOC1P02654 AC144522.1-201ENST00000625111 1658 ntBASIC12.52□□□□□ -0.4
APOC1P02654 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
APOC1P02654 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms