Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 NCLP1-201ENST00000445357 1963 ntBASIC14.32□□□□□ -0.12
CCDC78A2IDD5 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC78A2IDD5 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 TCAF1P1-201ENST00000414990 2232 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 HMGA1P1-201ENST00000415560 1062 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 AC078875.1-201ENST00000431907 724 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 SERPINA13P-202ENST00000478994 924 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 AC108725.1-201ENST00000495472 409 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 AC005740.2-201ENST00000511085 419 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 SNORD3B-2-202ENST00000571722 791 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 AL451050.2-201ENST00000606967 682 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 AL122018.1-201ENST00000446607 2310 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 MIR193BHG-211ENST00000641433 5365 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 AC007952.5-201ENST00000572818 1486 ntBASIC14.31□□□□□ -0.12
CCDC78A2IDD5 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC78A2IDD5 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 DPM3-202ENST00000368399 517 ntBASIC14.3□□□□□ -0.12
CCDC78A2IDD5 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.3□□□□□ -0.12
CCDC78A2IDD5 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms