Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AC112492.5-201ENST00000421897 457 ntBASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AL157407.1-201ENST00000435784 904 ntBASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AC022217.1-201ENST00000521069 738 ntBASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AP001889.1-201ENST00000525414 633 ntBASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AC132192.2-201ENST00000596206 1147 ntBASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 MIR6720-201ENST00000611664 98 ntBASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 ZACNP1-201ENST00000612259 710 ntBASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AL591471.1-201ENST00000621855 229 ntBASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AC006453.4-201ENST00000636949 1252 ntBASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 MARK2P16-201ENST00000605714 1723 ntBASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBE2D4Q9Y2X8 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.84
UBE2D4Q9Y2X8 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 AL355994.2-201ENST00000447882 704 ntBASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 AC140658.4-201ENST00000561990 352 ntBASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 KRT8P4-201ENST00000509735 1454 ntBASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF493-208ENST00000599461 1769 ntBASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
UBE2D4Q9Y2X8 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBE2D4Q9Y2X8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms