Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 AL807761.2-201ENST00000422849 729 ntBASIC13.36□□□□□ -0.27
TM9SF4Q92544 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 RN7SL81P-201ENST00000493781 261 ntBASIC13.36□□□□□ -0.27
TM9SF4Q92544 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 AP001065.2-201ENST00000617205 644 ntBASIC13.36□□□□□ -0.27
TM9SF4Q92544 AC007718.1-201ENST00000621078 280 ntBASIC13.36□□□□□ -0.27
TM9SF4Q92544 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 NUTM2HP-201ENST00000442076 2498 ntBASIC13.36□□□□□ -0.27
TM9SF4Q92544 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 TMBIM7P-202ENST00000641474 1516 ntBASIC13.35□□□□□ -0.27
TM9SF4Q92544 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 AL512430.1-201ENST00000392575 860 ntBASIC13.35□□□□□ -0.27
TM9SF4Q92544 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 KRT18P36-201ENST00000411618 1276 ntBASIC13.35□□□□□ -0.27
TM9SF4Q92544 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 AL627422.1-201ENST00000434104 580 ntBASIC13.35□□□□□ -0.27
TM9SF4Q92544 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 DUX4L50-201ENST00000455245 715 ntBASIC13.35□□□□□ -0.27
TM9SF4Q92544 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.35□□□□□ -0.27
TM9SF4Q92544 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 AC135983.4-201ENST00000564116 1262 ntBASIC13.35□□□□□ -0.27
TM9SF4Q92544 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 MARK2P16-201ENST00000605714 1723 ntBASIC13.35□□□□□ -0.27
TM9SF4Q92544 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TM9SF4Q92544 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.35□□□□□ -0.27
TM9SF4Q92544 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms