Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RFWD3Q6PCD5 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RFWD3Q6PCD5 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RFWD3Q6PCD5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RFWD3Q6PCD5 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.71□□□□□ -0.06
RFWD3Q6PCD5 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
RFWD3Q6PCD5 AC114271.1-201ENST00000612689 2813 ntBASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 TUBB8P4-201ENST00000511806 1324 ntBASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 AC114947.1-202ENST00000514136 344 ntBASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 AC068760.1-201ENST00000493579 1953 ntBASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFWD3Q6PCD5 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 AC007952.5-201ENST00000572818 1486 ntBASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 MARK2P16-201ENST00000605714 1723 ntBASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 AC126335.2-201ENST00000623362 4637 ntBASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 USP17L6P-201ENST00000382470 1197 ntBASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 FGFR3P1-201ENST00000449999 601 ntBASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 AC019193.1-201ENST00000506678 823 ntBASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 AL353726.2-201ENST00000623259 884 ntBASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RFWD3Q6PCD5 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms