Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 AC009118.3-201ENST00000622896 873 ntBASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 AC108024.1-201ENST00000626286 1721 ntBASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 MANEA-AS1-201ENST00000564541 2268 ntBASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42BPAQ5VT25 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 INTS4P1-203ENST00000641008 3683 ntBASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 WDR54-202ENST00000409791 854 ntTSL 3 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 AL033381.2-201ENST00000603854 732 ntBASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 NF1P11-201ENST00000621292 1282 ntBASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42BPAQ5VT25 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 KLK8-203ENST00000347619 555 ntTSL 2 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 AL356653.1-201ENST00000402743 360 ntBASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 DERL1-204ENST00000519018 575 ntTSL 4 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 ABCD1P3-201ENST00000562927 605 ntBASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 AC005332.2-201ENST00000590010 930 ntBASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 AL031768.1-201ENST00000606542 701 ntBASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 ZNF493-208ENST00000599461 1769 ntBASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 RN7SL838P-201ENST00000481676 295 ntBASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 KRT18P63-201ENST00000505463 979 ntBASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 PRDX2P3-201ENST00000515779 586 ntBASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 MIR4763-201ENST00000581461 92 ntBASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 BOLA3P2-201ENST00000586496 323 ntBASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC20.36■□□□□ 0.85
CDC42BPAQ5VT25 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 HNRNPA1P33-201ENST00000421426 561 ntBASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 AC010677.1-201ENST00000441690 412 ntBASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 RN7SL846P-201ENST00000467429 292 ntBASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 FRG2EP-201ENST00000634243 835 ntBASIC20.35■□□□□ 0.85
CDC42BPAQ5VT25 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms