Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 POM121L4P-202ENST00000427789 1891 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 HNRNPA1P73-201ENST00000446472 928 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 RN7SL838P-201ENST00000481676 295 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AC006273.1-201ENST00000606966 861 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 GOLGA8IP-202ENST00000611635 2100 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AC138430.2-201ENST00000624068 504 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 MIR766-201ENST00000390223 111 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 RN7SL678P-201ENST00000579533 299 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 MIR5193-201ENST00000584510 109 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 MIR6871-201ENST00000613433 56 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 CDC20P1-201ENST00000488829 1500 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 HNRNPA1P3-201ENST00000440968 551 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 AL049597.1-201ENST00000447415 555 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 RPL7AP53-201ENST00000468834 793 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 MIR4640-201ENST00000581824 90 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 CYP2B7P-201ENST00000541697 1476 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 HNRNPA1P9-201ENST00000450624 950 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 KRT18P45-201ENST00000515347 1333 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC9□□□□□ -0.97
VPS13DQ5THJ4 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
VPS13DQ5THJ4 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13DQ5THJ4 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 SOD1-202ENST00000389995 865 ntTSL 3 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 CXXC1P1-202ENST00000489409 1212 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 CYP4F10P-201ENST00000589560 752 ntBASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13DQ5THJ4 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms