Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MEG3_2.1-201ENST00000611456 105 ntBASIC12.63□□□□□ -0.39
HLA-DOBP13765 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 AC239868.1-201ENST00000369385 493 ntBASIC12.62□□□□□ -0.39
HLA-DOBP13765 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 ACTG1P2-201ENST00000415776 1125 ntBASIC12.62□□□□□ -0.39
HLA-DOBP13765 ACTG1P11-201ENST00000425411 1125 ntBASIC12.62□□□□□ -0.39
HLA-DOBP13765 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 CHCHD2P2-201ENST00000503744 321 ntBASIC12.62□□□□□ -0.39
HLA-DOBP13765 ALG1L13P-202ENST00000519320 584 ntBASIC12.62□□□□□ -0.39
HLA-DOBP13765 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 RN7SL455P-201ENST00000580629 282 ntBASIC12.62□□□□□ -0.39
HLA-DOBP13765 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 AC020914.3-201ENST00000594712 304 ntBASIC12.62□□□□□ -0.39
HLA-DOBP13765 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 AC135782.3-201ENST00000562782 2105 ntBASIC12.62□□□□□ -0.39
HLA-DOBP13765 MIR193BHG-211ENST00000641433 5365 ntBASIC12.62□□□□□ -0.39
HLA-DOBP13765 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DOBP13765 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DOBP13765 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 AC008620.2-201ENST00000510294 1569 ntBASIC12.61□□□□□ -0.39
HLA-DOBP13765 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms