Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.75□□□□□ -0.37
FREM3P0C091 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
FREM3P0C091 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.75□□□□□ -0.37
FREM3P0C091 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 PYY2-201ENST00000315776 282 ntBASIC12.75□□□□□ -0.37
FREM3P0C091 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.75□□□□□ -0.37
FREM3P0C091 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.75□□□□□ -0.37
FREM3P0C091 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 ERP29P1-201ENST00000442902 706 ntBASIC12.75□□□□□ -0.37
FREM3P0C091 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.75□□□□□ -0.37
FREM3P0C091 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.75□□□□□ -0.37
FREM3P0C091 AC008267.1-201ENST00000474858 1069 ntBASIC12.75□□□□□ -0.37
FREM3P0C091 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.75□□□□□ -0.37
FREM3P0C091 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.75□□□□□ -0.37
FREM3P0C091 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.75□□□□□ -0.37
FREM3P0C091 MIR3147-201ENST00000577811 66 ntBASIC12.75□□□□□ -0.37
FREM3P0C091 SNORD3B-1-201ENST00000577988 758 ntBASIC12.75□□□□□ -0.37
FREM3P0C091 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.75□□□□□ -0.37
FREM3P0C091 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.75□□□□□ -0.37
FREM3P0C091 AP003419.4-201ENST00000616071 517 ntBASIC12.75□□□□□ -0.37
FREM3P0C091 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.75□□□□□ -0.37
FREM3P0C091 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.75□□□□□ -0.37
FREM3P0C091 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.75□□□□□ -0.37
FREM3P0C091 AC092978.1-202ENST00000637590 1327 ntBASIC12.75□□□□□ -0.37
FREM3P0C091 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
FREM3P0C091 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.75□□□□□ -0.37
FREM3P0C091 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.74□□□□□ -0.37
FREM3P0C091 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.74□□□□□ -0.37
FREM3P0C091 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.74□□□□□ -0.37
FREM3P0C091 SLC25A15P3-201ENST00000505530 290 ntBASIC12.74□□□□□ -0.37
FREM3P0C091 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
FREM3P0C091 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
FREM3P0C091 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.74□□□□□ -0.37
FREM3P0C091 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
FREM3P0C091 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
FREM3P0C091 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.74□□□□□ -0.37
FREM3P0C091 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.74□□□□□ -0.37
FREM3P0C091 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
FREM3P0C091 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
FREM3P0C091 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.74□□□□□ -0.37
FREM3P0C091 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
FREM3P0C091 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 AC005562.1-201ENST00000583030 3219 ntBASIC12.74□□□□□ -0.37
FREM3P0C091 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.74□□□□□ -0.37
FREM3P0C091 AC092638.2-201ENST00000441105 947 ntBASIC12.74□□□□□ -0.37
FREM3P0C091 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.74□□□□□ -0.37
FREM3P0C091 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 AC007326.1-201ENST00000604539 458 ntBASIC12.74□□□□□ -0.37
FREM3P0C091 AC103691.2-201ENST00000618824 433 ntBASIC12.74□□□□□ -0.37
FREM3P0C091 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
FREM3P0C091 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.74□□□□□ -0.37
FREM3P0C091 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FREM3P0C091 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms