Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PDGFBP01127 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PDGFBP01127 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PDGFBP01127 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PDGFBP01127 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC13.88□□□□□ -0.19
PDGFBP01127 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PDGFBP01127 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
PDGFBP01127 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDGFBP01127 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.87□□□□□ -0.19
PDGFBP01127 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 AL031590.1-202ENST00000641466 1737 ntBASIC13.87□□□□□ -0.19
PDGFBP01127 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.87□□□□□ -0.19
PDGFBP01127 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.87□□□□□ -0.19
PDGFBP01127 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC13.87□□□□□ -0.19
PDGFBP01127 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC13.87□□□□□ -0.19
PDGFBP01127 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC13.87□□□□□ -0.19
PDGFBP01127 RN7SL2-201ENST00000490232 300 ntBASIC13.87□□□□□ -0.19
PDGFBP01127 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC13.87□□□□□ -0.19
PDGFBP01127 AC114812.4-201ENST00000506676 757 ntBASIC13.87□□□□□ -0.19
PDGFBP01127 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC13.87□□□□□ -0.19
PDGFBP01127 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.87□□□□□ -0.19
PDGFBP01127 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC13.87□□□□□ -0.19
PDGFBP01127 RN7SL4P-201ENST00000584058 295 ntBASIC13.87□□□□□ -0.19
PDGFBP01127 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC13.87□□□□□ -0.19
PDGFBP01127 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 AC015912.3-201ENST00000619432 348 ntBASIC13.87□□□□□ -0.19
PDGFBP01127 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.87□□□□□ -0.19
PDGFBP01127 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.87□□□□□ -0.19
PDGFBP01127 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDGFBP01127 AL590824.1-201ENST00000403828 1349 ntBASIC13.87□□□□□ -0.19
PDGFBP01127 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.87□□□□□ -0.19
PDGFBP01127 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDGFBP01127 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 AL022313.4-201ENST00000562756 2046 ntBASIC13.86□□□□□ -0.19
PDGFBP01127 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.86□□□□□ -0.19
PDGFBP01127 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.86□□□□□ -0.19
PDGFBP01127 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDGFBP01127 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PDGFBP01127 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC13.86□□□□□ -0.19
PDGFBP01127 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC13.86□□□□□ -0.19
PDGFBP01127 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms