Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 TSPY25P-201ENST00000429463 745 ntBASIC11.35□□□□□ -0.59
SRRM4A7MD48 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 SERPINA13P-202ENST00000478994 924 ntBASIC11.35□□□□□ -0.59
SRRM4A7MD48 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 AC091271.1-201ENST00000611877 1162 ntBASIC11.35□□□□□ -0.59
SRRM4A7MD48 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 NUTM2HP-201ENST00000442076 2498 ntBASIC11.35□□□□□ -0.59
SRRM4A7MD48 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 RPS9P1-201ENST00000419943 583 ntBASIC11.34□□□□□ -0.59
SRRM4A7MD48 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 CHCHD2P2-201ENST00000503744 321 ntBASIC11.34□□□□□ -0.59
SRRM4A7MD48 AC106794.1-201ENST00000506935 792 ntBASIC11.34□□□□□ -0.59
SRRM4A7MD48 AC005740.2-201ENST00000511085 419 ntBASIC11.34□□□□□ -0.59
SRRM4A7MD48 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 AC126915.1-201ENST00000522847 1038 ntBASIC11.34□□□□□ -0.59
SRRM4A7MD48 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 CCNC-217ENST00000523985 958 ntTSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 AC093752.3-201ENST00000567343 901 ntBASIC11.34□□□□□ -0.59
SRRM4A7MD48 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.34□□□□□ -0.59
SRRM4A7MD48 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SRRM4A7MD48 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms