Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SYNPO2Q9UMS6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AL358781.1-202ENST00000321081 1360 ntBASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 VENTXP4-201ENST00000449029 958 ntBASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 KRT18P66-201ENST00000452970 1269 ntBASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 TBC1D3P6-201ENST00000505954 962 ntBASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 FAM86B3P-203ENST00000523992 854 ntBASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 TREHP1-201ENST00000531328 465 ntBASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AC068831.5-201ENST00000557387 328 ntBASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AL160191.2-201ENST00000603975 601 ntBASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AC113385.2-201ENST00000614465 762 ntBASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AC023908.3-201ENST00000564211 3047 ntBASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SYNPO2Q9UMS6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 AL512599.1-201ENST00000430724 685 ntBASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 AL139008.1-201ENST00000437894 228 ntBASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 AC026470.1-201ENST00000478038 846 ntBASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 SAA2-206ENST00000530400 323 ntTSL 3 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 ABCD1P2-201ENST00000429313 1601 ntBASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 AGAP10P-201ENST00000454844 2418 ntBASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SYNPO2Q9UMS6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms