Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.09□□□□□ -0.31
POLR2J2Q9GZM3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
POLR2J2Q9GZM3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.08□□□□□ -0.31
POLR2J2Q9GZM3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.08□□□□□ -0.31
POLR2J2Q9GZM3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
POLR2J2Q9GZM3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.08□□□□□ -0.31
POLR2J2Q9GZM3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
POLR2J2Q9GZM3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 AL023775.1-201ENST00000454907 1746 ntBASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 AL354877.1-201ENST00000424412 413 ntBASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 NME2P1-201ENST00000426182 414 ntBASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 LINC02486-201ENST00000604157 3000 ntBASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 RPL13AP3-202ENST00000494676 1473 ntBASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
POLR2J2Q9GZM3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 AC136604.1-202ENST00000425471 771 ntBASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 KRT17P7-201ENST00000451704 1104 ntBASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 GOLGA2P8-201ENST00000505201 779 ntBASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 AP005018.1-201ENST00000525475 301 ntBASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 CR383656.12-201ENST00000549567 513 ntBASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 MIR4783-201ENST00000580343 82 ntBASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.07□□□□□ -0.32
POLR2J2Q9GZM3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms