Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC010997.1-201ENST00000447646 350 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 MFSD12-215ENST00000615613 688 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 GOLGA8VP-201ENST00000559009 1798 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 MANEA-AS1-201ENST00000564541 2268 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 PHBP3-201ENST00000412562 819 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AK2P2-201ENST00000439142 405 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 KRT18P8-201ENST00000581937 1246 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC092535.4-201ENST00000609548 397 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 FRG2EP-201ENST00000634243 835 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AL137077.1-201ENST00000442115 528 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 SLC25A51P3-201ENST00000521814 889 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 FTO-214ENST00000636218 2227 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 RNA5SP407-201ENST00000410275 110 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AC007881.1-201ENST00000437460 187 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 FPGT-205ENST00000482102 561 ntTSL 4 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AL356740.1-201ENST00000602192 1297 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 Z98259.1-201ENST00000564261 1697 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 ALMS1P1-201ENST00000428767 921 ntBASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC9.01□□□□□ -0.97
VPS13DQ5THJ4 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms